libStatGen Software 1
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This is the complete list of members for Person, including all inherited members.
affectionCount (defined in PedigreeGlobals) | PedigreeGlobals | static |
affectionLookup (defined in PedigreeGlobals) | PedigreeGlobals | static |
affectionNames (defined in PedigreeGlobals) | PedigreeGlobals | static |
affections (defined in Person) | Person | |
AlleleFrequenciesAvailable() (defined in PedigreeGlobals) | PedigreeGlobals | static |
AssessStatus() (defined in Person) | Person | |
CheckParents() (defined in Person) | Person | |
chromosomeX (defined in PedigreeGlobals) | PedigreeGlobals | static |
Copy(Person &rhs) (defined in Person) | Person | |
CopyIDs(Person &rhs) (defined in Person) | Person | |
CopyPhenotypes(Person &rhs) (defined in Person) | Person | |
covariateCount (defined in PedigreeGlobals) | PedigreeGlobals | static |
covariateLookup (defined in PedigreeGlobals) | PedigreeGlobals | static |
covariateNames (defined in PedigreeGlobals) | PedigreeGlobals | static |
covariates (defined in Person) | Person | |
famid (defined in Person) | Person | |
father (defined in Person) | Person | |
fatid (defined in Person) | Person | |
filter (defined in Person) | Person | |
FlagMissingMarkers(IntArray &missingMarkers) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GenotypedMarkers() (defined in Person) | Person | |
GetAffectionID(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GetCovariateID(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GetMarkerID(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GetMarkerInfo(String &name) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GetMarkerInfo(int marker) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GetOrderedMarkers(IntArray &markers) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GetStringID(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GetTraitID(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | static |
GrowMarkerInfo() (defined in PedigreeGlobals) | PedigreeGlobals | static |
haveData() (defined in Person) | Person | |
isAncestor(Person *descendant) (defined in Person) | Person | |
isControlled(int c) (defined in Person) | Person | inline |
isDiagnosed(int a) (defined in Person) | Person | inline |
isFounder() (defined in Person) | Person | inline |
isFullyControlled() (defined in Person) | Person | inline |
isFullyDiagnosed() (defined in Person) | Person | inline |
isFullyGenotyped() (defined in Person) | Person | inline |
isFullyPhenotyped() (defined in Person) | Person | inline |
isGenotyped(int m) (defined in Person) | Person | inline |
isHalfSib(Person &sib) (defined in Person) | Person | inline |
isMzTwin(Person &mzTwin) (defined in Person) | Person | inline |
isPhenotyped(int t) (defined in Person) | Person | inline |
isSexed() (defined in Person) | Person | inline |
isSib(Person &sib) (defined in Person) | Person | inline |
isTwin(Person &twin) (defined in Person) | Person | inline |
LoadAllele(int marker, String &label) (defined in PedigreeGlobals) | PedigreeGlobals | static |
LoadAllele(MarkerInfo *info, String &label) (defined in PedigreeGlobals) | PedigreeGlobals | static |
LoadAlleleFrequencies(const char *filename, bool required=false) (defined in PedigreeGlobals) | PedigreeGlobals | static |
LoadAlleleFrequencies(IFILE &file) (defined in PedigreeGlobals) | PedigreeGlobals | static |
LoadBasepairMap(const char *filename) (defined in PedigreeGlobals) | PedigreeGlobals | static |
LoadBasepairMap(IFILE &file) (defined in PedigreeGlobals) | PedigreeGlobals | static |
LoadMarkerMap(const char *filename, bool filter=false) (defined in PedigreeGlobals) | PedigreeGlobals | static |
LoadMarkerMap(IFILE &file, bool filter=false) (defined in PedigreeGlobals) | PedigreeGlobals | static |
LookupAffection(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | inlinestatic |
LookupCovariate(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | inlinestatic |
LookupMarker(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | inlinestatic |
LookupString(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | inlinestatic |
LookupTrait(const char *name) (defined in PedigreeGlobals) | PedigreeGlobals | inlinestatic |
markerCount (defined in PedigreeGlobals) | PedigreeGlobals | static |
markerInfo (defined in PedigreeGlobals) | PedigreeGlobals | static |
markerInfoByInteger (defined in PedigreeGlobals) | PedigreeGlobals | static |
markerInfoByName (defined in PedigreeGlobals) | PedigreeGlobals | static |
markerInfoCount (defined in PedigreeGlobals) | PedigreeGlobals | static |
markerInfoSize (defined in PedigreeGlobals) | PedigreeGlobals | static |
markerLookup (defined in PedigreeGlobals) | PedigreeGlobals | static |
markerNames (defined in PedigreeGlobals) | PedigreeGlobals | static |
MarkerPositionsAvailable() (defined in PedigreeGlobals) | PedigreeGlobals | static |
markers (defined in Person) | Person | |
mother (defined in Person) | Person | |
motid (defined in Person) | Person | |
ngeno (defined in Person) | Person | |
Order(Person *&p1, Person *&p2) (defined in Person) | Person | static |
PedigreeGlobals() (defined in PedigreeGlobals) | PedigreeGlobals | inline |
Person() (defined in Person) | Person | |
pid (defined in Person) | Person | |
serial (defined in Person) | Person | |
sex (defined in Person) | Person | |
sexSpecificMap (defined in PedigreeGlobals) | PedigreeGlobals | static |
sibCount (defined in Person) | Person | |
sibs (defined in Person) | Person | |
SortMarkersInMapOrder(IntArray &markers, int chromosome=-1) (defined in PedigreeGlobals) | PedigreeGlobals | static |
stringCount (defined in PedigreeGlobals) | PedigreeGlobals | static |
stringLookup (defined in PedigreeGlobals) | PedigreeGlobals | static |
stringNames (defined in PedigreeGlobals) | PedigreeGlobals | static |
strings (defined in Person) | Person | |
traitCount (defined in PedigreeGlobals) | PedigreeGlobals | static |
traitLookup (defined in PedigreeGlobals) | PedigreeGlobals | static |
traitNames (defined in PedigreeGlobals) | PedigreeGlobals | static |
traits (defined in Person) | Person | |
traverse (defined in Person) | Person | |
VerifySexSpecificOrder() (defined in PedigreeGlobals) | PedigreeGlobals | static |
WipePhenotypes(bool remove_genotypes=true) (defined in Person) | Person | |
WriteFreqFile(const char *filename, bool old_format=false) (defined in PedigreeGlobals) | PedigreeGlobals | static |
WriteFreqFile(FILE *file, bool old_format=false) (defined in PedigreeGlobals) | PedigreeGlobals | static |
WriteMapFile(const char *filename) (defined in PedigreeGlobals) | PedigreeGlobals | static |
WriteMapFile(FILE *file) (defined in PedigreeGlobals) | PedigreeGlobals | static |
zygosity (defined in Person) | Person | |
~PedigreeGlobals() (defined in PedigreeGlobals) | PedigreeGlobals | |
~Person() (defined in Person) | Person |